Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC134312.5-201ENST00000568031 1313 ntBASIC11.79□□□□□ -0.52
DEFA4P12838 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.79□□□□□ -0.52
DEFA4P12838 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
DEFA4P12838 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
DEFA4P12838 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.79□□□□□ -0.52
DEFA4P12838 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.79□□□□□ -0.52
DEFA4P12838 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
DEFA4P12838 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
DEFA4P12838 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
DEFA4P12838 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.78□□□□□ -0.52
DEFA4P12838 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.78□□□□□ -0.52
DEFA4P12838 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 MIR661-201ENST00000384842 89 ntBASIC11.78□□□□□ -0.52
DEFA4P12838 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.78□□□□□ -0.52
DEFA4P12838 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 AL355864.2-201ENST00000447420 863 ntBASIC11.78□□□□□ -0.52
DEFA4P12838 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.78□□□□□ -0.52
DEFA4P12838 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.78□□□□□ -0.52
DEFA4P12838 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 AC022137.2-201ENST00000503482 481 ntBASIC11.78□□□□□ -0.52
DEFA4P12838 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.78□□□□□ -0.52
DEFA4P12838 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 WASH4P-201ENST00000564273 1246 ntBASIC11.78□□□□□ -0.52
DEFA4P12838 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.78□□□□□ -0.52
DEFA4P12838 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.78□□□□□ -0.52
DEFA4P12838 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 AC020658.7-201ENST00000624274 2442 ntBASIC11.78□□□□□ -0.52
DEFA4P12838 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
DEFA4P12838 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.78□□□□□ -0.52
DEFA4P12838 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.78□□□□□ -0.52
DEFA4P12838 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
DEFA4P12838 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
DEFA4P12838 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
DEFA4P12838 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
DEFA4P12838 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
DEFA4P12838 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
DEFA4P12838 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
DEFA4P12838 AC005014.1-201ENST00000432006 2976 ntBASIC11.77□□□□□ -0.52
DEFA4P12838 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
DEFA4P12838 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.77□□□□□ -0.52
DEFA4P12838 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
DEFA4P12838 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.77□□□□□ -0.52
DEFA4P12838 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
DEFA4P12838 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.77□□□□□ -0.53
DEFA4P12838 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.77□□□□□ -0.53
DEFA4P12838 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
DEFA4P12838 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
DEFA4P12838 DGCR5-201ENST00000399539 862 ntBASIC11.77□□□□□ -0.53
DEFA4P12838 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
DEFA4P12838 BAATP1-201ENST00000412284 1225 ntBASIC11.77□□□□□ -0.53
DEFA4P12838 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.77□□□□□ -0.53
DEFA4P12838 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.77□□□□□ -0.53
DEFA4P12838 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 RN7SL752P-201ENST00000463779 287 ntBASIC11.77□□□□□ -0.53
DEFA4P12838 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
DEFA4P12838 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms