Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GAPDHP04406 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
GAPDHP04406 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GAPDHP04406 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
GAPDHP04406 FAM8A4P-201ENST00000435433 1213 ntBASIC12.1□□□□□ -0.47
GAPDHP04406 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.1□□□□□ -0.47
GAPDHP04406 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.1□□□□□ -0.47
GAPDHP04406 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.1□□□□□ -0.47
GAPDHP04406 AC106886.1-201ENST00000568660 600 ntBASIC12.1□□□□□ -0.47
GAPDHP04406 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.1□□□□□ -0.47
GAPDHP04406 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 MIR6074-201ENST00000612054 107 ntBASIC12.1□□□□□ -0.47
GAPDHP04406 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.1□□□□□ -0.47
GAPDHP04406 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
GAPDHP04406 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.1□□□□□ -0.47
GAPDHP04406 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 NCLP1-201ENST00000445357 1963 ntBASIC12.1□□□□□ -0.47
GAPDHP04406 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.1□□□□□ -0.47
GAPDHP04406 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAPDHP04406 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
GAPDHP04406 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
GAPDHP04406 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.09□□□□□ -0.47
GAPDHP04406 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.09□□□□□ -0.47
GAPDHP04406 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.09□□□□□ -0.47
GAPDHP04406 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
GAPDHP04406 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 AL136172.1-201ENST00000598590 1394 ntBASIC12.09□□□□□ -0.47
GAPDHP04406 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 PCDHB18P-202ENST00000526308 3197 ntBASIC12.09□□□□□ -0.47
GAPDHP04406 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.09□□□□□ -0.47
GAPDHP04406 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
GAPDHP04406 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.09□□□□□ -0.47
GAPDHP04406 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.09□□□□□ -0.47
GAPDHP04406 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAPDHP04406 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.09□□□□□ -0.47
GAPDHP04406 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms