Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.64■□□□□ 0.09
VTNP04004 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.64■□□□□ 0.09
VTNP04004 RNA5SP417-201ENST00000516459 108 ntBASIC15.64■□□□□ 0.09
VTNP04004 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 AP000911.2-201ENST00000534330 502 ntBASIC15.64■□□□□ 0.09
VTNP04004 CR383656.3-201ENST00000551315 183 ntBASIC15.64■□□□□ 0.09
VTNP04004 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.64■□□□□ 0.09
VTNP04004 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 MIR2392-201ENST00000584881 84 ntBASIC15.64■□□□□ 0.09
VTNP04004 MIR6858-201ENST00000620733 67 ntBASIC15.64■□□□□ 0.09
VTNP04004 MIR600HG-201ENST00000449175 5984 ntBASIC15.64■□□□□ 0.09
VTNP04004 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.64■□□□□ 0.09
VTNP04004 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.64■□□□□ 0.09
VTNP04004 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VTNP04004 IL9RP3-201ENST00000442856 1674 ntBASIC15.63■□□□□ 0.09
VTNP04004 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.63■□□□□ 0.09
VTNP04004 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 AL354861.1-201ENST00000445213 355 ntBASIC15.63■□□□□ 0.09
VTNP04004 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.63■□□□□ 0.09
VTNP04004 AC018463.1-201ENST00000456674 917 ntBASIC15.63■□□□□ 0.09
VTNP04004 OR5BD1P-201ENST00000532527 817 ntBASIC15.63■□□□□ 0.09
VTNP04004 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.63■□□□□ 0.09
VTNP04004 KLF17P1-201ENST00000547105 1126 ntBASIC15.63■□□□□ 0.09
VTNP04004 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.63■□□□□ 0.09
VTNP04004 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.63■□□□□ 0.09
VTNP04004 RN7SL470P-201ENST00000583069 259 ntBASIC15.63■□□□□ 0.09
VTNP04004 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
VTNP04004 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.63■□□□□ 0.09
VTNP04004 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
VTNP04004 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VTNP04004 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.63■□□□□ 0.09
VTNP04004 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VTNP04004 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VTNP04004 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.62■□□□□ 0.09
VTNP04004 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.62■□□□□ 0.09
VTNP04004 BX679664.3-201ENST00000414070 555 ntBASIC15.62■□□□□ 0.09
VTNP04004 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.62■□□□□ 0.09
VTNP04004 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VTNP04004 AC113935.1-201ENST00000471722 555 ntBASIC15.62■□□□□ 0.09
VTNP04004 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.62■□□□□ 0.09
VTNP04004 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.62■□□□□ 0.09
VTNP04004 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
VTNP04004 AP000322.3-201ENST00000608665 388 ntBASIC15.62■□□□□ 0.09
VTNP04004 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms