Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DQB1P01920 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DQB1P01920 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 TREML5P-201ENST00000421694 576 ntBASIC12.41□□□□□ -0.42
HLA-DQB1P01920 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 FO681548.1-201ENST00000455617 1132 ntBASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AC009407.1-201ENST00000568958 598 ntBASIC12.41□□□□□ -0.42
HLA-DQB1P01920 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 CR392039.2-201ENST00000623182 509 ntBASIC12.41□□□□□ -0.42
HLA-DQB1P01920 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AOC4P-203ENST00000566825 2289 ntBASIC12.41□□□□□ -0.42
HLA-DQB1P01920 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AC138969.2-201ENST00000532739 9932 ntBASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DQB1P01920 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-DQB1P01920 RN7SL399P-201ENST00000471648 279 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms