Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 TSPY26P-202ENST00000565928 3884 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 MIR632-201ENST00000385193 94 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 FTH1P18-201ENST00000412071 549 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 KRT18P44-201ENST00000416086 1285 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 AC092810.2-201ENST00000431570 362 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 OR4C14P-201ENST00000440929 923 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.19□□□□□ -0.14
PDGFBP01127 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.19□□□□□ -0.14
PDGFBP01127 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 KRT8P34-201ENST00000577607 1044 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 IFNL3P1-201ENST00000595082 501 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 AC009041.4-201ENST00000620075 638 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 AL590556.2-202ENST00000636906 844 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PDGFBP01127 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PDGFBP01127 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDGFBP01127 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 LILRP2-202ENST00000413572 1383 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 AC136621.1-201ENST00000624017 2304 ntBASIC14.19□□□□□ -0.14
PDGFBP01127 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFBP01127 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PDGFBP01127 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PDGFBP01127 ACE3P-201ENST00000423435 1973 ntBASIC14.18□□□□□ -0.14
PDGFBP01127 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.18□□□□□ -0.14
PDGFBP01127 AL161932.2-201ENST00000435436 679 ntBASIC14.18□□□□□ -0.14
PDGFBP01127 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.18□□□□□ -0.14
PDGFBP01127 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.18□□□□□ -0.14
PDGFBP01127 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC14.18□□□□□ -0.14
PDGFBP01127 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDGFBP01127 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDGFBP01127 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFBP01127 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms