Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.45□□□□□ -0.1
RFPL1O75677 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.45□□□□□ -0.1
RFPL1O75677 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.45□□□□□ -0.1
RFPL1O75677 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.45□□□□□ -0.1
RFPL1O75677 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.45□□□□□ -0.1
RFPL1O75677 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFPL1O75677 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RFPL1O75677 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 CNN2P8-201ENST00000421872 913 ntBASIC14.44□□□□□ -0.1
RFPL1O75677 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.44□□□□□ -0.1
RFPL1O75677 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 Z93015.1-201ENST00000451718 390 ntBASIC14.44□□□□□ -0.1
RFPL1O75677 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.44□□□□□ -0.1
RFPL1O75677 FAM86HP-204ENST00000513466 959 ntBASIC14.44□□□□□ -0.1
RFPL1O75677 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.44□□□□□ -0.1
RFPL1O75677 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.44□□□□□ -0.1
RFPL1O75677 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 GNRHR2-203ENST00000581100 1187 ntBASIC14.44□□□□□ -0.1
RFPL1O75677 AL118558.3-201ENST00000607414 1079 ntBASIC14.44□□□□□ -0.1
RFPL1O75677 AL022328.3-201ENST00000607943 679 ntBASIC14.44□□□□□ -0.1
RFPL1O75677 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.44□□□□□ -0.1
RFPL1O75677 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.44□□□□□ -0.1
RFPL1O75677 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFPL1O75677 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms