Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 MYB-201ENST00000316528 3571 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC6.16□□□□□ -1.42
USH2AO75445 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 RPL13AP5-201ENST00000439189 612 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC6.16□□□□□ -1.42
USH2AO75445 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC6.16□□□□□ -1.42
USH2AO75445 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 PTN-202ENST00000393083 1599 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AC010086.2-201ENST00000428616 226 ntBASIC6.16□□□□□ -1.42
USH2AO75445 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 PHBP18-201ENST00000546648 813 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC104759.1-201ENST00000559109 939 ntBASIC6.16□□□□□ -1.42
USH2AO75445 RN7SL827P-201ENST00000607480 288 ntBASIC6.16□□□□□ -1.42
USH2AO75445 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USH2AO75445 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USH2AO75445 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USH2AO75445 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AD000864.1-201ENST00000624076 2295 ntBASIC6.16□□□□□ -1.42
USH2AO75445 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 TFAM-201ENST00000373895 973 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AL121994.1-201ENST00000413189 402 ntBASIC6.16□□□□□ -1.42
USH2AO75445 GGT8P-201ENST00000418938 532 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 AC139143.1-201ENST00000441772 1207 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC104333.3-201ENST00000449334 479 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC6.16□□□□□ -1.42
USH2AO75445 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USH2AO75445 SNORA30.1-201ENST00000363193 129 ntBASIC6.15□□□□□ -1.42
USH2AO75445 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC6.15□□□□□ -1.42
USH2AO75445 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC6.15□□□□□ -1.42
USH2AO75445 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC6.15□□□□□ -1.42
USH2AO75445 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms