Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.59□□□□□ -0.55
SRRM4A7MD48 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
SRRM4A7MD48 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SRRM4A7MD48 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SRRM4A7MD48 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SRRM4A7MD48 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.59□□□□□ -0.55
SRRM4A7MD48 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SRRM4A7MD48 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
SRRM4A7MD48 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
SRRM4A7MD48 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 C8orf49-201ENST00000525043 1968 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC079178.1-201ENST00000420915 656 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 HLA-V-201ENST00000429037 534 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 CSF2RBP1-201ENST00000447905 391 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC104989.1-201ENST00000519711 778 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC100827.2-201ENST00000563214 1194 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 MIR4741-201ENST00000579822 90 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AC144522.1-201ENST00000625111 1658 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SRRM4A7MD48 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 CYP4F23P-201ENST00000593402 1579 ntBASIC11.58□□□□□ -0.56
SRRM4A7MD48 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
SRRM4A7MD48 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC099336.1-201ENST00000417053 1171 ntBASIC11.57□□□□□ -0.56
SRRM4A7MD48 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC124068.2-201ENST00000569473 1109 ntBASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC005962.1-201ENST00000584100 773 ntBASIC11.57□□□□□ -0.56
SRRM4A7MD48 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.57□□□□□ -0.56
SRRM4A7MD48 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SRRM4A7MD48 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.57□□□□□ -0.56
SRRM4A7MD48 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 300.6 ms