Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 METTL7AP1-201ENST00000547343 496 ntBASIC17.85■□□□□ 0.45
SCN11AQ9UI33 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 AC103702.1-201ENST00000548801 2630 ntBASIC17.85■□□□□ 0.45
SCN11AQ9UI33 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN11AQ9UI33 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AC092570.1-201ENST00000414446 469 ntBASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AC245140.2-201ENST00000624054 1939 ntBASIC17.84■□□□□ 0.45
SCN11AQ9UI33 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 PHBP10-201ENST00000416467 784 ntBASIC17.84■□□□□ 0.45
SCN11AQ9UI33 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AL136084.1-201ENST00000449172 318 ntBASIC17.84■□□□□ 0.45
SCN11AQ9UI33 RNA5SP420-201ENST00000516997 137 ntBASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 AC139713.2-207ENST00000641556 1292 ntBASIC17.84■□□□□ 0.45
SCN11AQ9UI33 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN11AQ9UI33 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.83■□□□□ 0.45
SCN11AQ9UI33 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 SNORA57-201ENST00000383870 149 ntBASIC17.83■□□□□ 0.44
SCN11AQ9UI33 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 PRMT1P1-201ENST00000604252 1009 ntBASIC17.83■□□□□ 0.44
SCN11AQ9UI33 AC123912.6-201ENST00000612657 315 ntBASIC17.83■□□□□ 0.44
SCN11AQ9UI33 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN11AQ9UI33 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms