Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
COL20A1Q9P218 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COL20A1Q9P218 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL20A1Q9P218 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PDXDC2P-206ENST00000534700 1315 ntBASIC16.05■□□□□ 0.16
COL20A1Q9P218 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 RNVU1-8-201ENST00000364272 125 ntBASIC16.05■□□□□ 0.16
COL20A1Q9P218 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 AC004837.1-201ENST00000446267 564 ntBASIC16.05■□□□□ 0.16
COL20A1Q9P218 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 KRT8P2-201ENST00000556193 944 ntBASIC16.05■□□□□ 0.16
COL20A1Q9P218 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL20A1Q9P218 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.05■□□□□ 0.16
COL20A1Q9P218 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AC016397.2-201ENST00000624848 1985 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 HSPA7-201ENST00000445535 1927 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AL627389.1-201ENST00000413508 1182 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 PIN4P1-201ENST00000451079 396 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 MIR4265-201ENST00000582152 99 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 AC140113.1-201ENST00000603467 169 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 MST1P2-201ENST00000457982 2291 ntBASIC16.04■□□□□ 0.16
COL20A1Q9P218 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
COL20A1Q9P218 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL20A1Q9P218 ODCP-201ENST00000459650 1639 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms