Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 AC083964.2-201ENST00000623988 2396 ntBASIC17.72■□□□□ 0.43
UPF2Q9HAU5 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 CLUHP2-201ENST00000426660 1303 ntBASIC17.72■□□□□ 0.43
UPF2Q9HAU5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.72■□□□□ 0.43
UPF2Q9HAU5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.71■□□□□ 0.43
UPF2Q9HAU5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 DUX4L27-201ENST00000554796 1261 ntBASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AC104506.1-201ENST00000609247 429 ntBASIC17.71■□□□□ 0.43
UPF2Q9HAU5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 MIR8072-201ENST00000614241 80 ntBASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AC005252.2-201ENST00000624630 1141 ntBASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AL928654.5-201ENST00000624831 2501 ntBASIC17.71■□□□□ 0.43
UPF2Q9HAU5 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
UPF2Q9HAU5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UPF2Q9HAU5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UPF2Q9HAU5 FKBP4P6-201ENST00000457486 1332 ntBASIC17.71■□□□□ 0.42
UPF2Q9HAU5 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.42
UPF2Q9HAU5 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UPF2Q9HAU5 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms