Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
VGLL1Q99990 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.99□□□□□ -0.65
VGLL1Q99990 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 POM121L8P-201ENST00000417732 1281 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 POM121L9P-203ENST00000441984 1285 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 UGT1A2P-201ENST00000454886 866 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.99□□□□□ -0.65
VGLL1Q99990 AC022137.2-201ENST00000503482 481 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.99□□□□□ -0.65
VGLL1Q99990 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.99□□□□□ -0.65
VGLL1Q99990 AL132655.2-201ENST00000596276 594 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 BX088702.1-201ENST00000610784 235 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 AC138466.3-201ENST00000619983 221 ntBASIC10.99□□□□□ -0.65
VGLL1Q99990 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC10.99□□□□□ -0.65
VGLL1Q99990 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VGLL1Q99990 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
VGLL1Q99990 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 AL118506.1-201ENST00000601296 3082 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 AC004899.2-201ENST00000622993 3860 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
VGLL1Q99990 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.98□□□□□ -0.65
VGLL1Q99990 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
VGLL1Q99990 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC10.98□□□□□ -0.65
VGLL1Q99990 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 RAC2-204ENST00000406508 893 ntTSL 5 BASIC10.98□□□□□ -0.65
VGLL1Q99990 AC087499.6-201ENST00000411576 835 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
VGLL1Q99990 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 ELK1P1-201ENST00000485699 580 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 INGX-202ENST00000489074 768 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 AL391280.1-201ENST00000506969 1062 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 SERBP1P5-201ENST00000510079 1181 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.98□□□□□ -0.65
VGLL1Q99990 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.98□□□□□ -0.65
VGLL1Q99990 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.98□□□□□ -0.65
VGLL1Q99990 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 AL391825.1-201ENST00000457671 1364 ntBASIC10.98□□□□□ -0.65
VGLL1Q99990 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VGLL1Q99990 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.98□□□□□ -0.65
VGLL1Q99990 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms