Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNX18Q96RF0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SNX18Q96RF0 AC011700.1-201ENST00000610409 2627 ntBASIC13.21□□□□□ -0.3
SNX18Q96RF0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SNX18Q96RF0 AC134407.3-201ENST00000624035 2139 ntBASIC13.21□□□□□ -0.3
SNX18Q96RF0 AC139712.1-201ENST00000378256 1875 ntBASIC13.21□□□□□ -0.3
SNX18Q96RF0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNX18Q96RF0 AC015688.4-201ENST00000580780 1647 ntBASIC13.21□□□□□ -0.3
SNX18Q96RF0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNX18Q96RF0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC023794.5-201ENST00000564380 2157 ntBASIC13.2□□□□□ -0.3
SNX18Q96RF0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 BAATP1-201ENST00000412284 1225 ntBASIC13.2□□□□□ -0.3
SNX18Q96RF0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC008735.3-201ENST00000596646 500 ntBASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 AP000593.2-201ENST00000542775 1433 ntBASIC13.2□□□□□ -0.3
SNX18Q96RF0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.2□□□□□ -0.3
SNX18Q96RF0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNX18Q96RF0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNX18Q96RF0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.19□□□□□ -0.3
SNX18Q96RF0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 PTP4A1P2-201ENST00000546033 454 ntBASIC13.19□□□□□ -0.3
SNX18Q96RF0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SORD2P-201ENST00000558556 1069 ntBASIC13.19□□□□□ -0.3
SNX18Q96RF0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AC015936.2-201ENST00000593177 259 ntBASIC13.19□□□□□ -0.3
SNX18Q96RF0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 AL512343.1-201ENST00000605837 169 ntBASIC13.19□□□□□ -0.3
SNX18Q96RF0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SNX18Q96RF0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNX18Q96RF0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms