Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AC011495.1-201ENST00000498085 584 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AP001889.1-201ENST00000525414 633 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AC005586.2-201ENST00000563946 837 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AC009486.1-201ENST00000569860 813 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AC010319.3-201ENST00000597028 470 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AC244669.2-201ENST00000612320 853 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 AC002472.3-201ENST00000640124 621 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 CICP1-201ENST00000416803 2410 ntBASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.69■□□□□ 0.26
CHAMP1Q96JM3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC087499.6-201ENST00000411576 835 ntBASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC068587.3-201ENST00000526613 355 ntBASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 RN7SL48P-201ENST00000579283 293 ntBASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 AC073413.1-201ENST00000603927 732 ntBASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHAMP1Q96JM3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 AP000437.1-201ENST00000624057 2085 ntBASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.67■□□□□ 0.26
CHAMP1Q96JM3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms