Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHMP7Q8WUX9 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 AC021321.1-201ENST00000607397 1113 ntBASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 AL139158.3-201ENST00000641212 1562 ntBASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 AC026691.1-201ENST00000602502 2017 ntBASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHMP7Q8WUX9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 HMGA1P1-201ENST00000415560 1062 ntBASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 RPSAP6-201ENST00000417882 882 ntBASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 MIR4326-201ENST00000582203 59 ntBASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CHMP7Q8WUX9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AL590824.1-201ENST00000403828 1349 ntBASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AC068760.1-201ENST00000493579 1953 ntBASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 AC134878.2-201ENST00000620700 1265 ntBASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHMP7Q8WUX9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHMP7Q8WUX9 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHMP7Q8WUX9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms