Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 AC125604.1-201ENST00000496255 707 ntBASIC15.02■□□□□ -0
TTC39BQ5VTQ0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.02■□□□□ -0
TTC39BQ5VTQ0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.02■□□□□ -0
TTC39BQ5VTQ0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 TCAM1P-207ENST00000485295 1537 ntBASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 AL133338.1-201ENST00000565695 1517 ntBASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TTC39BQ5VTQ0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC087386.2-201ENST00000623212 4637 ntBASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC138969.2-201ENST00000532739 9932 ntBASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 SORD2P-201ENST00000558556 1069 ntBASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC026740.1-201ENST00000607068 791 ntBASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 AC020910.6-201ENST00000623084 1459 ntBASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.01□□□□□ -0.01
TTC39BQ5VTQ0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TTC39BQ5VTQ0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms