Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
FAM78BQ5VT40 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AL139094.1-201ENST00000405549 1188 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 PMS2P2-201ENST00000425039 1128 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC022616.1-201ENST00000518688 554 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC009407.1-201ENST00000568958 598 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC036164.1-201ENST00000570544 333 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AP002761.4-201ENST00000565433 3361 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.51□□□□□ -0.57
FAM78BQ5VT40 AC003102.2-201ENST00000589195 1469 ntBASIC11.51□□□□□ -0.57
FAM78BQ5VT40 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
FAM78BQ5VT40 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms