Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 HTR7P1-202ENST00000624664 4411 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 GUCY2EP-203ENST00000531117 1918 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AF013593.1-201ENST00000458074 1487 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC147876.1-201ENST00000504408 322 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 CTBP2P6-201ENST00000526402 1229 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AP003040.1-201ENST00000532044 1024 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC048382.6-201ENST00000621980 1223 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC110057.1-201ENST00000636031 898 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CDC42BPAQ5VT25 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42BPAQ5VT25 AC245140.2-201ENST00000624054 1939 ntBASIC20.89■□□□□ 0.94
CDC42BPAQ5VT25 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDC42BPAQ5VT25 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 RN7SL524P-201ENST00000581152 300 ntBASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CDC42BPAQ5VT25 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 HNRNPA1P42-201ENST00000458678 957 ntBASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 ALG1L15P-201ENST00000482834 794 ntBASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 GOLGA8IP-202ENST00000611635 2100 ntBASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC42BPAQ5VT25 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 AC016397.2-201ENST00000624848 1985 ntBASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42BPAQ5VT25 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms