Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 OR2W2P-201ENST00000406313 909 ntBASIC13.67□□□□□ -0.22
RIF1Q5UIP0 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 PGK1P2-201ENST00000431702 1214 ntBASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AL121992.3-201ENST00000606186 346 ntBASIC13.67□□□□□ -0.22
RIF1Q5UIP0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 PCDHA12-202ENST00000613593 2588 ntBASIC13.67□□□□□ -0.22
RIF1Q5UIP0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 SRP9P1-201ENST00000445874 261 ntBASIC13.67□□□□□ -0.22
RIF1Q5UIP0 PDPN-208ENST00000509009 571 ntTSL 4 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AL049840.2-201ENST00000602722 535 ntBASIC13.67□□□□□ -0.22
RIF1Q5UIP0 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AL031577.1-201ENST00000339867 399 ntBASIC13.66□□□□□ -0.22
RIF1Q5UIP0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 RN7SL202P-201ENST00000584410 262 ntBASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 MKL1-204ENST00000402630 747 ntTSL 2 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RIF1Q5UIP0 AC113398.1-201ENST00000464124 406 ntBASIC13.66□□□□□ -0.22
RIF1Q5UIP0 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms