Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.69□□□□□ -0.22
SKP1P63208 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.69□□□□□ -0.22
SKP1P63208 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 TSPY25P-201ENST00000429463 745 ntBASIC13.69□□□□□ -0.22
SKP1P63208 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.69□□□□□ -0.22
SKP1P63208 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.69□□□□□ -0.22
SKP1P63208 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SKP1P63208 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 AC011498.7-201ENST00000624986 2027 ntBASIC13.69□□□□□ -0.22
SKP1P63208 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 AL122018.1-201ENST00000446607 2310 ntBASIC13.69□□□□□ -0.22
SKP1P63208 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 TCAM1P-207ENST00000485295 1537 ntBASIC13.69□□□□□ -0.22
SKP1P63208 AL157791.1-201ENST00000553667 1699 ntBASIC13.69□□□□□ -0.22
SKP1P63208 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SKP1P63208 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.68□□□□□ -0.22
SKP1P63208 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SKP1P63208 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.68□□□□□ -0.22
SKP1P63208 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.68□□□□□ -0.22
SKP1P63208 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.68□□□□□ -0.22
SKP1P63208 AC016700.1-201ENST00000429424 312 ntBASIC13.68□□□□□ -0.22
SKP1P63208 CALR4P-201ENST00000431943 946 ntBASIC13.68□□□□□ -0.22
SKP1P63208 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 OR2R1P-201ENST00000441404 914 ntBASIC13.68□□□□□ -0.22
SKP1P63208 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.68□□□□□ -0.22
SKP1P63208 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.68□□□□□ -0.22
SKP1P63208 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.68□□□□□ -0.22
SKP1P63208 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms