Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 AC073150.1-201ENST00000450406 1084 ntBASIC16.53■□□□□ 0.24
CHMP4BP1P59074 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 AC116345.2-201ENST00000512837 523 ntBASIC16.53■□□□□ 0.24
CHMP4BP1P59074 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 MIR6720-201ENST00000611664 98 ntBASIC16.53■□□□□ 0.24
CHMP4BP1P59074 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.53■□□□□ 0.24
CHMP4BP1P59074 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP4BP1P59074 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 FAM58BP-201ENST00000439056 645 ntBASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AC006335.1-201ENST00000445200 547 ntBASIC16.52■□□□□ 0.24
CHMP4BP1P59074 FGFR3P1-201ENST00000449999 601 ntBASIC16.52■□□□□ 0.24
CHMP4BP1P59074 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AC103988.2-201ENST00000561804 725 ntBASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 AC007718.1-201ENST00000621078 280 ntBASIC16.52■□□□□ 0.24
CHMP4BP1P59074 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP4BP1P59074 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 AC018529.2-202ENST00000611482 3087 ntBASIC16.52■□□□□ 0.23
CHMP4BP1P59074 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 CICP17-201ENST00000418553 2377 ntBASIC16.52■□□□□ 0.23
CHMP4BP1P59074 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP4BP1P59074 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms