Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.52□□□□□ -0.08
WNT3AP56704 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
WNT3AP56704 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.52□□□□□ -0.08
WNT3AP56704 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.52□□□□□ -0.08
WNT3AP56704 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3AP56704 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
WNT3AP56704 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3AP56704 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3AP56704 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3AP56704 AL512310.5-201ENST00000551999 515 ntBASIC14.52□□□□□ -0.09
WNT3AP56704 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3AP56704 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3AP56704 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3AP56704 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 AL136295.7-201ENST00000619226 1200 ntBASIC14.52□□□□□ -0.09
WNT3AP56704 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3AP56704 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3AP56704 AC111170.3-201ENST00000624282 2464 ntBASIC14.52□□□□□ -0.09
WNT3AP56704 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
WNT3AP56704 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
WNT3AP56704 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3AP56704 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
WNT3AP56704 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
WNT3AP56704 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
WNT3AP56704 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.51□□□□□ -0.09
WNT3AP56704 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.51□□□□□ -0.09
WNT3AP56704 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 PFN1P12-201ENST00000455938 534 ntBASIC14.51□□□□□ -0.09
WNT3AP56704 AC005740.2-201ENST00000511085 419 ntBASIC14.51□□□□□ -0.09
WNT3AP56704 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.51□□□□□ -0.09
WNT3AP56704 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.51□□□□□ -0.09
WNT3AP56704 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3AP56704 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
WNT3AP56704 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3AP56704 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms