Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.53□□□□□ -0.08
LIMK2P53671 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.53□□□□□ -0.08
LIMK2P53671 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.53□□□□□ -0.08
LIMK2P53671 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.53□□□□□ -0.08
LIMK2P53671 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.53□□□□□ -0.08
LIMK2P53671 AC126915.1-201ENST00000522847 1038 ntBASIC14.53□□□□□ -0.08
LIMK2P53671 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.53□□□□□ -0.08
LIMK2P53671 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.53□□□□□ -0.08
LIMK2P53671 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.53□□□□□ -0.08
LIMK2P53671 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.53□□□□□ -0.08
LIMK2P53671 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIMK2P53671 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.53□□□□□ -0.08
LIMK2P53671 AC079781.5-202ENST00000641784 3743 ntBASIC14.53□□□□□ -0.08
LIMK2P53671 AC072061.1-201ENST00000569710 2234 ntBASIC14.53□□□□□ -0.08
LIMK2P53671 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LIMK2P53671 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.53□□□□□ -0.08
LIMK2P53671 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LIMK2P53671 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIMK2P53671 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIMK2P53671 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LIMK2P53671 KRT8P4-201ENST00000509735 1454 ntBASIC14.52□□□□□ -0.08
LIMK2P53671 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LIMK2P53671 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIMK2P53671 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.52□□□□□ -0.08
LIMK2P53671 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LIMK2P53671 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LIMK2P53671 BX284668.4-201ENST00000453917 508 ntBASIC14.52□□□□□ -0.09
LIMK2P53671 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.52□□□□□ -0.09
LIMK2P53671 MIR4683-201ENST00000579659 81 ntBASIC14.52□□□□□ -0.09
LIMK2P53671 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.52□□□□□ -0.09
LIMK2P53671 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.52□□□□□ -0.09
LIMK2P53671 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.52□□□□□ -0.09
LIMK2P53671 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.52□□□□□ -0.09
LIMK2P53671 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LIMK2P53671 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.52□□□□□ -0.09
LIMK2P53671 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LIMK2P53671 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMK2P53671 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMK2P53671 USP17L6P-201ENST00000382470 1197 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 SLC25A24P2-201ENST00000415059 510 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIMK2P53671 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 FNTAP2-201ENST00000430308 634 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK2P53671 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 CHMP1AP1-201ENST00000445563 662 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 AL035414.1-201ENST00000451327 857 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMK2P53671 CICP12-201ENST00000455801 843 ntBASIC14.51□□□□□ -0.09
LIMK2P53671 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.51□□□□□ -0.09
LIMK2P53671 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms