Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HTTP42858 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.49■□□□□ 0.07
HTTP42858 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.49■□□□□ 0.07
HTTP42858 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC15.49■□□□□ 0.07
HTTP42858 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
HTTP42858 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HTTP42858 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 AC005014.1-201ENST00000432006 2976 ntBASIC15.49■□□□□ 0.07
HTTP42858 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
HTTP42858 AP001331.1-201ENST00000413008 1015 ntBASIC15.48■□□□□ 0.07
HTTP42858 AC015818.1-201ENST00000451011 244 ntBASIC15.48■□□□□ 0.07
HTTP42858 AL161727.1-201ENST00000457409 530 ntBASIC15.48■□□□□ 0.07
HTTP42858 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC15.48■□□□□ 0.07
HTTP42858 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC15.48■□□□□ 0.07
HTTP42858 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC15.48■□□□□ 0.07
HTTP42858 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HTTP42858 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HTTP42858 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HTTP42858 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC15.48■□□□□ 0.07
HTTP42858 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 EGLN3-205ENST00000547327 2849 ntBASIC15.48■□□□□ 0.07
HTTP42858 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
HTTP42858 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.48■□□□□ 0.07
HTTP42858 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.48■□□□□ 0.07
HTTP42858 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HTTP42858 AC079250.1-201ENST00000456046 531 ntBASIC15.48■□□□□ 0.07
HTTP42858 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 AC022966.2-201ENST00000587434 367 ntBASIC15.48■□□□□ 0.07
HTTP42858 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
HTTP42858 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC15.48■□□□□ 0.07
HTTP42858 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTTP42858 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.47■□□□□ 0.07
HTTP42858 CICP16-201ENST00000502609 2813 ntBASIC15.47■□□□□ 0.07
HTTP42858 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.47■□□□□ 0.07
HTTP42858 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 ACTG1P23-201ENST00000437653 1074 ntBASIC15.47■□□□□ 0.07
HTTP42858 DUX4L31-201ENST00000446466 1136 ntBASIC15.47■□□□□ 0.07
HTTP42858 COQ10BP2-201ENST00000513804 724 ntBASIC15.47■□□□□ 0.07
HTTP42858 OR4A49P-201ENST00000527050 632 ntBASIC15.47■□□□□ 0.07
HTTP42858 AL512310.5-201ENST00000551999 515 ntBASIC15.47■□□□□ 0.07
HTTP42858 AL139317.2-201ENST00000556998 158 ntBASIC15.47■□□□□ 0.07
HTTP42858 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
HTTP42858 AC063977.2-201ENST00000601996 421 ntBASIC15.47■□□□□ 0.07
HTTP42858 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HTTP42858 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.47■□□□□ 0.07
HTTP42858 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.47■□□□□ 0.07
HTTP42858 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 SORD2P-201ENST00000558556 1069 ntBASIC15.47■□□□□ 0.07
HTTP42858 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC15.47■□□□□ 0.07
HTTP42858 AL365181.3-201ENST00000605886 3222 ntBASIC15.47■□□□□ 0.07
HTTP42858 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HTTP42858 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms