Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 ANKRD19P-201ENST00000338192 862 ntBASIC16.43■□□□□ 0.22
CLCN1P35523 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 MIR770-201ENST00000390219 98 ntBASIC16.43■□□□□ 0.22
CLCN1P35523 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.43■□□□□ 0.22
CLCN1P35523 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 INGX-202ENST00000489074 768 ntBASIC16.43■□□□□ 0.22
CLCN1P35523 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.43■□□□□ 0.22
CLCN1P35523 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.43■□□□□ 0.22
CLCN1P35523 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLCN1P35523 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.43■□□□□ 0.22
CLCN1P35523 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLCN1P35523 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 AC126564.1-201ENST00000623628 2013 ntBASIC16.43■□□□□ 0.22
CLCN1P35523 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN1P35523 PCDHA5-203ENST00000614258 4248 ntBASIC16.43■□□□□ 0.22
CLCN1P35523 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN1P35523 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN1P35523 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CLCN1P35523 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCN1P35523 SPTLC1P1-201ENST00000447199 261 ntBASIC16.42■□□□□ 0.22
CLCN1P35523 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCN1P35523 AC026410.3-201ENST00000514280 936 ntBASIC16.42■□□□□ 0.22
CLCN1P35523 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN1P35523 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCN1P35523 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN1P35523 AC036164.1-201ENST00000570544 333 ntBASIC16.42■□□□□ 0.22
CLCN1P35523 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCN1P35523 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.42■□□□□ 0.22
CLCN1P35523 MIR8072-201ENST00000614241 80 ntBASIC16.42■□□□□ 0.22
CLCN1P35523 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN1P35523 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 AC131212.3-201ENST00000624087 4219 ntBASIC16.42■□□□□ 0.22
CLCN1P35523 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CLCN1P35523 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 AL445250.1-201ENST00000641671 2259 ntBASIC16.42■□□□□ 0.22
CLCN1P35523 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.42■□□□□ 0.22
CLCN1P35523 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.42■□□□□ 0.22
CLCN1P35523 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLCN1P35523 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms