Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 AC074138.1-201ENST00000611182 1303 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 AC023908.3-201ENST00000564211 3047 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.29■□□□□ 0.2
HOXA13P31271 NOC2LP1-201ENST00000450578 752 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.29■□□□□ 0.2
HOXA13P31271 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 MIR3147-201ENST00000577811 66 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 AC073352.2-201ENST00000609385 439 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXA13P31271 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXA13P31271 AL591122.2-201ENST00000624125 1853 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HOXA13P31271 AC020910.6-201ENST00000623084 1459 ntBASIC16.29■□□□□ 0.2
HOXA13P31271 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXA13P31271 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXA13P31271 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 AL512310.5-201ENST00000551999 515 ntBASIC16.28■□□□□ 0.2
HOXA13P31271 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.28■□□□□ 0.2
HOXA13P31271 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.28■□□□□ 0.2
HOXA13P31271 AC005632.3-201ENST00000605544 308 ntBASIC16.28■□□□□ 0.2
HOXA13P31271 AL021707.6-201ENST00000609212 491 ntBASIC16.28■□□□□ 0.2
HOXA13P31271 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXA13P31271 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 OR2I1P-210ENST00000642037 4691 ntBASIC16.28■□□□□ 0.2
HOXA13P31271 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXA13P31271 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXA13P31271 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HOXA13P31271 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms