Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NCLP19338 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.28■□□□□ 0.36
NCLP19338 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCLP19338 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NCLP19338 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NCLP19338 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC17.27■□□□□ 0.36
NCLP19338 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.27■□□□□ 0.36
NCLP19338 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NCLP19338 GIMAP3P-201ENST00000495150 836 ntBASIC17.27■□□□□ 0.36
NCLP19338 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NCLP19338 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.27■□□□□ 0.36
NCLP19338 TMEM261P1-201ENST00000604899 340 ntBASIC17.27■□□□□ 0.36
NCLP19338 BX539320.1-201ENST00000623759 877 ntBASIC17.27■□□□□ 0.36
NCLP19338 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NCLP19338 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCLP19338 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
NCLP19338 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCLP19338 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.27■□□□□ 0.35
NCLP19338 RN7SL832P-201ENST00000607781 1756 ntBASIC17.27■□□□□ 0.35
NCLP19338 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCLP19338 AL805961.2-201ENST00000642139 4817 ntBASIC17.27■□□□□ 0.35
NCLP19338 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NCLP19338 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCLP19338 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
NCLP19338 AC073548.1-201ENST00000624088 1882 ntBASIC17.27■□□□□ 0.35
NCLP19338 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NCLP19338 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 OR8S1-201ENST00000310194 1080 ntBASIC17.26■□□□□ 0.35
NCLP19338 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 AL512384.1-201ENST00000406683 331 ntBASIC17.26■□□□□ 0.35
NCLP19338 U91328.1-201ENST00000437528 223 ntBASIC17.26■□□□□ 0.35
NCLP19338 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.26■□□□□ 0.35
NCLP19338 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.26■□□□□ 0.35
NCLP19338 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.26■□□□□ 0.35
NCLP19338 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC17.26■□□□□ 0.35
NCLP19338 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.26■□□□□ 0.35
NCLP19338 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NCLP19338 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC17.26■□□□□ 0.35
NCLP19338 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.26■□□□□ 0.35
NCLP19338 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.26■□□□□ 0.35
NCLP19338 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCLP19338 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NCLP19338 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
NCLP19338 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms