Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ATF1P18846 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 PCDHA6-201ENST00000378126 3267 ntBASIC12.68□□□□□ -0.38
ATF1P18846 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ATF1P18846 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 AC134312.5-201ENST00000568031 1313 ntBASIC12.67□□□□□ -0.38
ATF1P18846 AC064801.2-201ENST00000625052 1303 ntBASIC12.67□□□□□ -0.38
ATF1P18846 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 MKRN5P-201ENST00000445263 1467 ntBASIC12.67□□□□□ -0.38
ATF1P18846 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 BAATP1-201ENST00000412284 1225 ntBASIC12.67□□□□□ -0.38
ATF1P18846 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 AC136604.1-202ENST00000425471 771 ntBASIC12.67□□□□□ -0.38
ATF1P18846 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 AC012441.1-201ENST00000446669 685 ntBASIC12.67□□□□□ -0.38
ATF1P18846 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 ALG3P1-201ENST00000508806 1114 ntBASIC12.67□□□□□ -0.38
ATF1P18846 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 WASH4P-201ENST00000564273 1246 ntBASIC12.67□□□□□ -0.38
ATF1P18846 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 RN7SL48P-201ENST00000579283 293 ntBASIC12.67□□□□□ -0.38
ATF1P18846 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
ATF1P18846 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.67□□□□□ -0.38
ATF1P18846 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
ATF1P18846 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATF1P18846 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms