Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 KRT8P28-201ENST00000433288 1390 ntBASIC14.11□□□□□ -0.15
PCNAP12004 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.11□□□□□ -0.15
PCNAP12004 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.11□□□□□ -0.15
PCNAP12004 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 AL355994.2-201ENST00000447882 704 ntBASIC14.11□□□□□ -0.15
PCNAP12004 HOMER2P2-201ENST00000451621 847 ntBASIC14.11□□□□□ -0.15
PCNAP12004 CICP12-201ENST00000455801 843 ntBASIC14.11□□□□□ -0.15
PCNAP12004 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.11□□□□□ -0.15
PCNAP12004 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.11□□□□□ -0.15
PCNAP12004 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.11□□□□□ -0.15
PCNAP12004 AP000812.2-201ENST00000538934 718 ntBASIC14.11□□□□□ -0.15
PCNAP12004 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 AL512343.1-201ENST00000605837 169 ntBASIC14.11□□□□□ -0.15
PCNAP12004 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.11□□□□□ -0.15
PCNAP12004 AC027601.3-201ENST00000622907 509 ntBASIC14.11□□□□□ -0.15
PCNAP12004 AL035252.4-201ENST00000624174 288 ntBASIC14.11□□□□□ -0.15
PCNAP12004 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 PPT1-213ENST00000641319 2388 ntBASIC14.11□□□□□ -0.15
PCNAP12004 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.11□□□□□ -0.15
PCNAP12004 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PCNAP12004 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PCNAP12004 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCNAP12004 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PCNAP12004 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNAP12004 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.1□□□□□ -0.15
PCNAP12004 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.1□□□□□ -0.15
PCNAP12004 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 AC026954.1-201ENST00000429771 1293 ntBASIC14.1□□□□□ -0.15
PCNAP12004 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNAP12004 CNN2P10-201ENST00000443067 918 ntBASIC14.1□□□□□ -0.15
PCNAP12004 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.1□□□□□ -0.15
PCNAP12004 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PCNAP12004 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.1□□□□□ -0.15
PCNAP12004 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.1□□□□□ -0.15
PCNAP12004 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.1□□□□□ -0.15
PCNAP12004 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.1□□□□□ -0.15
PCNAP12004 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.1□□□□□ -0.15
PCNAP12004 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.1□□□□□ -0.15
PCNAP12004 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCNAP12004 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms