Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TOP1P11387 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.91■□□□□ 0.3
TOP1P11387 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TOP1P11387 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 AP002353.1-201ENST00000528257 1599 ntBASIC16.9■□□□□ 0.3
TOP1P11387 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.9■□□□□ 0.3
TOP1P11387 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 AL353637.1-201ENST00000451571 732 ntBASIC16.9■□□□□ 0.3
TOP1P11387 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.9■□□□□ 0.3
TOP1P11387 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.9■□□□□ 0.3
TOP1P11387 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.9■□□□□ 0.3
TOP1P11387 AC020922.3-201ENST00000595064 547 ntBASIC16.9■□□□□ 0.3
TOP1P11387 AL606495.2-201ENST00000605867 535 ntBASIC16.9■□□□□ 0.3
TOP1P11387 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.9■□□□□ 0.3
TOP1P11387 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 FRMPD2B-201ENST00000431305 1347 ntBASIC16.9■□□□□ 0.3
TOP1P11387 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 BEND3P1-201ENST00000421591 1944 ntBASIC16.9■□□□□ 0.3
TOP1P11387 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TOP1P11387 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TOP1P11387 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TOP1P11387 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TOP1P11387 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TOP1P11387 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.89■□□□□ 0.3
TOP1P11387 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.89■□□□□ 0.3
TOP1P11387 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TOP1P11387 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.89■□□□□ 0.3
TOP1P11387 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TOP1P11387 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TOP1P11387 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.89■□□□□ 0.29
TOP1P11387 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.89■□□□□ 0.29
TOP1P11387 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.89■□□□□ 0.29
TOP1P11387 UPF3AP2-201ENST00000457924 1132 ntBASIC16.89■□□□□ 0.29
TOP1P11387 RN7SL720P-201ENST00000488178 304 ntBASIC16.89■□□□□ 0.29
TOP1P11387 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.89■□□□□ 0.29
TOP1P11387 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.89■□□□□ 0.29
TOP1P11387 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.89■□□□□ 0.29
TOP1P11387 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.89■□□□□ 0.29
TOP1P11387 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.89■□□□□ 0.29
TOP1P11387 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.89■□□□□ 0.29
TOP1P11387 MEG3_2.1-201ENST00000611456 105 ntBASIC16.89■□□□□ 0.29
TOP1P11387 AL353770.1-201ENST00000614915 403 ntBASIC16.89■□□□□ 0.29
TOP1P11387 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.89■□□□□ 0.29
TOP1P11387 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.89■□□□□ 0.29
TOP1P11387 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TOP1P11387 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.89■□□□□ 0.29
TOP1P11387 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TOP1P11387 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TOP1P11387 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TOP1P11387 AC010327.5-201ENST00000586923 3061 ntBASIC16.88■□□□□ 0.29
TOP1P11387 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TOP1P11387 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TOP1P11387 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP1P11387 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP1P11387 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms