Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CD28P10747 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 HPGD-203ENST00000422112 805 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC11.28□□□□□ -0.6
CD28P10747 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC11.28□□□□□ -0.6
CD28P10747 RPSAP15-201ENST00000448168 861 ntBASIC11.28□□□□□ -0.6
CD28P10747 DUX4L50-201ENST00000455245 715 ntBASIC11.28□□□□□ -0.6
CD28P10747 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 AC104784.1-201ENST00000473096 294 ntBASIC11.28□□□□□ -0.6
CD28P10747 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.28□□□□□ -0.6
CD28P10747 AC007326.1-201ENST00000604539 458 ntBASIC11.28□□□□□ -0.6
CD28P10747 AC087045.2-201ENST00000606279 1003 ntBASIC11.28□□□□□ -0.6
CD28P10747 AP003419.4-201ENST00000616071 517 ntBASIC11.28□□□□□ -0.6
CD28P10747 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 AC011491.1-203ENST00000637688 543 ntBASIC11.28□□□□□ -0.6
CD28P10747 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 AC007686.3-201ENST00000619017 3487 ntBASIC11.28□□□□□ -0.6
CD28P10747 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 AC106881.1-201ENST00000605849 3329 ntBASIC11.28□□□□□ -0.6
CD28P10747 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.28□□□□□ -0.6
CD28P10747 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.28□□□□□ -0.6
CD28P10747 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CD28P10747 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 PTENP1-202ENST00000532280 3996 ntBASIC11.27□□□□□ -0.6
CD28P10747 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
CD28P10747 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.27□□□□□ -0.6
CD28P10747 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.27□□□□□ -0.6
CD28P10747 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
CD28P10747 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
CD28P10747 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CD28P10747 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
CD28P10747 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CD28P10747 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 KHSRPP1-201ENST00000427983 1768 ntBASIC11.27□□□□□ -0.61
CD28P10747 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 243.9 ms