Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TPM3P06753 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TPM3P06753 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TPM3P06753 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TPM3P06753 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TPM3P06753 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.21■□□□□ 0.18
TPM3P06753 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.21■□□□□ 0.18
TPM3P06753 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TPM3P06753 AC107375.1-201ENST00000564464 2231 ntBASIC16.21■□□□□ 0.18
TPM3P06753 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TPM3P06753 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TPM3P06753 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.2■□□□□ 0.18
TPM3P06753 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TPM3P06753 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TPM3P06753 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
TPM3P06753 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.2■□□□□ 0.18
TPM3P06753 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TPM3P06753 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TPM3P06753 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 EIF3FP3-201ENST00000434851 1086 ntBASIC16.2■□□□□ 0.18
TPM3P06753 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.2■□□□□ 0.18
TPM3P06753 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TPM3P06753 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM3P06753 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TPM3P06753 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.2■□□□□ 0.18
TPM3P06753 AGAP12P-201ENST00000585227 2359 ntBASIC16.2■□□□□ 0.18
TPM3P06753 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
TPM3P06753 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM3P06753 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TPM3P06753 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TPM3P06753 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM3P06753 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
TPM3P06753 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM3P06753 AL022323.5-201ENST00000624101 2059 ntBASIC16.19■□□□□ 0.18
TPM3P06753 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM3P06753 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM3P06753 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TPM3P06753 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 MIR943-201ENST00000401286 94 ntBASIC16.19■□□□□ 0.18
TPM3P06753 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TPM3P06753 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM3P06753 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.19■□□□□ 0.18
TPM3P06753 AC138761.1-201ENST00000584393 385 ntBASIC16.19■□□□□ 0.18
TPM3P06753 AP005019.2-201ENST00000615104 511 ntBASIC16.19■□□□□ 0.18
TPM3P06753 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 USP47-202ENST00000339865 7775 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM3P06753 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM3P06753 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM3P06753 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TPM3P06753 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms