Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL5A2P05997 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.3■□□□□ 0.52
COL5A2P05997 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COL5A2P05997 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC18.3■□□□□ 0.52
COL5A2P05997 AL359092.2-201ENST00000423330 585 ntBASIC18.3■□□□□ 0.52
COL5A2P05997 SNRPCP15-201ENST00000424055 192 ntBASIC18.3■□□□□ 0.52
COL5A2P05997 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC18.3■□□□□ 0.52
COL5A2P05997 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC18.3■□□□□ 0.52
COL5A2P05997 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC18.3■□□□□ 0.52
COL5A2P05997 TPT1P6-201ENST00000458298 514 ntBASIC18.3■□□□□ 0.52
COL5A2P05997 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.3■□□□□ 0.52
COL5A2P05997 RN7SL480P-201ENST00000581481 294 ntBASIC18.3■□□□□ 0.52
COL5A2P05997 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 NRADDP-202ENST00000641269 1585 ntBASIC18.3■□□□□ 0.52
COL5A2P05997 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
COL5A2P05997 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 HSPA8P5-201ENST00000456928 2069 ntBASIC18.29■□□□□ 0.52
COL5A2P05997 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 HLF-202ENST00000430986 1385 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 CCL25-202ENST00000315626 450 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 AC104212.2-201ENST00000478813 628 ntBASIC18.29■□□□□ 0.52
COL5A2P05997 RPL29P2-202ENST00000498671 657 ntBASIC18.29■□□□□ 0.52
COL5A2P05997 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC18.29■□□□□ 0.52
COL5A2P05997 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC18.29■□□□□ 0.52
COL5A2P05997 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.29■□□□□ 0.52
COL5A2P05997 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.29■□□□□ 0.52
COL5A2P05997 RN7SL134P-201ENST00000579756 303 ntBASIC18.29■□□□□ 0.52
COL5A2P05997 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.29■□□□□ 0.52
COL5A2P05997 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC18.29■□□□□ 0.52
COL5A2P05997 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL5A2P05997 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.29■□□□□ 0.52
COL5A2P05997 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL5A2P05997 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.29■□□□□ 0.52
COL5A2P05997 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 FGD5P1-202ENST00000614866 2498 ntBASIC18.28■□□□□ 0.52
COL5A2P05997 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 KRT8P38-201ENST00000441370 1430 ntBASIC18.28■□□□□ 0.52
COL5A2P05997 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL5A2P05997 AL008638.4-201ENST00000624792 1315 ntBASIC18.28■□□□□ 0.52
COL5A2P05997 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.28■□□□□ 0.52
COL5A2P05997 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.28■□□□□ 0.52
COL5A2P05997 PHBP18-201ENST00000546648 813 ntBASIC18.28■□□□□ 0.52
COL5A2P05997 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.28■□□□□ 0.52
COL5A2P05997 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC18.28■□□□□ 0.52
COL5A2P05997 AC005865.2-202ENST00000635814 725 ntBASIC18.28■□□□□ 0.52
COL5A2P05997 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL5A2P05997 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.28■□□□□ 0.52
COL5A2P05997 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms