Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
MT-ND1P03886 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.65□□□□□ -0.23
MT-ND1P03886 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.64□□□□□ -0.23
MT-ND1P03886 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MT-ND1P03886 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MT-ND1P03886 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 CYMP-203ENST00000474680 1263 ntBASIC13.64□□□□□ -0.23
MT-ND1P03886 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AC123567.1-201ENST00000548294 1261 ntBASIC13.64□□□□□ -0.23
MT-ND1P03886 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.64□□□□□ -0.23
MT-ND1P03886 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.64□□□□□ -0.23
MT-ND1P03886 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.64□□□□□ -0.23
MT-ND1P03886 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MT-ND1P03886 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MT-ND1P03886 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
MT-ND1P03886 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms