Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.83□□□□□ -0.36
APOC1P02654 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
APOC1P02654 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC1P02654 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
APOC1P02654 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC1P02654 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC1P02654 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 SLC25A47P1-201ENST00000531577 414 ntBASIC12.83□□□□□ -0.36
APOC1P02654 AC027237.1-201ENST00000560942 655 ntBASIC12.83□□□□□ -0.36
APOC1P02654 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 AC233724.13-201ENST00000598383 410 ntBASIC12.83□□□□□ -0.36
APOC1P02654 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.83□□□□□ -0.36
APOC1P02654 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 AC002472.3-201ENST00000640124 621 ntBASIC12.83□□□□□ -0.36
APOC1P02654 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.83□□□□□ -0.36
APOC1P02654 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 AL928921.2-201ENST00000641325 2442 ntBASIC12.82□□□□□ -0.36
APOC1P02654 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
APOC1P02654 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 AC004945.1-201ENST00000416738 983 ntBASIC12.82□□□□□ -0.36
APOC1P02654 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 KRT43P-201ENST00000434019 910 ntBASIC12.82□□□□□ -0.36
APOC1P02654 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
APOC1P02654 RN7SL837P-201ENST00000463010 287 ntBASIC12.82□□□□□ -0.36
APOC1P02654 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.82□□□□□ -0.36
APOC1P02654 AL391280.1-201ENST00000506969 1062 ntBASIC12.82□□□□□ -0.36
APOC1P02654 AC106760.1-201ENST00000508690 800 ntBASIC12.82□□□□□ -0.36
APOC1P02654 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
APOC1P02654 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 AC005586.2-201ENST00000563946 837 ntBASIC12.82□□□□□ -0.36
APOC1P02654 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.82□□□□□ -0.36
APOC1P02654 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.82□□□□□ -0.36
APOC1P02654 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.82□□□□□ -0.36
APOC1P02654 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
APOC1P02654 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOC1P02654 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms