Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.21■□□□□ 0.03
TIMP1P01033 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TIMP1P01033 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
TIMP1P01033 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TIMP1P01033 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TIMP1P01033 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.21■□□□□ 0.02
TIMP1P01033 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 AL008638.4-201ENST00000624792 1315 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.2■□□□□ 0.02
TIMP1P01033 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TIMP1P01033 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 AGAP7P-201ENST00000582299 2062 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 AGAP14-201ENST00000624701 2060 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TIMP1P01033 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 AC098657.1-201ENST00000416270 1135 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMP1P01033 AP000533.1-201ENST00000456143 1177 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 RPSAP70-201ENST00000504462 864 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC15.2■□□□□ 0.02
TIMP1P01033 AC004923.3-201ENST00000527532 355 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 FAM187B2P-201ENST00000577135 713 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMP1P01033 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMP1P01033 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMP1P01033 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TIMP1P01033 AC245369.7-201ENST00000631386 350 ntBASIC15.2■□□□□ 0.02
TIMP1P01033 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TIMP1P01033 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TIMP1P01033 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMP1P01033 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMP1P01033 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 AL121949.3-201ENST00000406684 385 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 FAM197Y6-201ENST00000420524 766 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 RPL18AP16-201ENST00000424057 531 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP1P01033 AC010900.1-201ENST00000449849 1296 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 RN7SL578P-201ENST00000477781 283 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP1P01033 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP1P01033 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 BX322534.1-201ENST00000635574 241 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 AC215524.1-201ENST00000635696 241 ntBASIC15.19■□□□□ 0.02
TIMP1P01033 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMP1P01033 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMP1P01033 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMP1P01033 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMP1P01033 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms