Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-2O95096 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NKX2-2O95096 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.23□□□□□ -0.29
NKX2-2O95096 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-2O95096 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 RCC2P8-201ENST00000502779 1035 ntBASIC13.23□□□□□ -0.29
NKX2-2O95096 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-2O95096 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-2O95096 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-2O95096 MIR3188-201ENST00000583494 85 ntBASIC13.23□□□□□ -0.29
NKX2-2O95096 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-2O95096 AL118558.3-201ENST00000607414 1079 ntBASIC13.23□□□□□ -0.29
NKX2-2O95096 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX2-2O95096 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-2O95096 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX2-2O95096 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-2O95096 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-2O95096 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-2O95096 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 AL928654.5-201ENST00000624831 2501 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-2O95096 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-2O95096 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
NKX2-2O95096 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-2O95096 AC125604.1-201ENST00000496255 707 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-2O95096 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-2O95096 MIR3615-201ENST00000581999 87 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 AL022328.3-201ENST00000607943 679 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-2O95096 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-2O95096 RPL13AP3-202ENST00000494676 1473 ntBASIC13.22□□□□□ -0.29
NKX2-2O95096 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-2O95096 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms