Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AL442647.2-201ENST00000429864 857 ntBASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC027237.1-201ENST00000560942 655 ntBASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 LINC00567-201ENST00000569854 3409 ntBASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 CLUHP2-201ENST00000426660 1303 ntBASIC12.35□□□□□ -0.43
TMEM235A6NFC5 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 MARK2P9-201ENST00000430958 1727 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AL161932.2-201ENST00000435436 679 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 PUDPP3-201ENST00000445368 636 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC004890.2-204ENST00000481968 304 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 KRT18P25-201ENST00000508931 1278 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 BX088702.1-201ENST00000610784 235 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC005252.2-201ENST00000624630 1141 ntBASIC12.34□□□□□ -0.43
TMEM235A6NFC5 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TMEM235A6NFC5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM235A6NFC5 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM235A6NFC5 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM235A6NFC5 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.33□□□□□ -0.43
TMEM235A6NFC5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.33□□□□□ -0.43
TMEM235A6NFC5 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms