Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 AC079776.1-201ENST00000401540 1152 ntBASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CNN2P10-201ENST00000443067 918 ntBASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ACA64.2-201ENST00000459014 129 ntBASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 KRT8P4-201ENST00000509735 1454 ntBASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 AL358472.3-201ENST00000608147 415 ntBASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.92□□□□□ -0.66
HLA-DRB4X5D2U9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms