Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 SBF1P1-201ENST00000444527 5631 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 KRT18P36-201ENST00000411618 1276 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 ST13P19-201ENST00000442505 1124 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AL596276.2-201ENST00000447525 331 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AC090857.1-201ENST00000527400 390 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CHMP4BP1-201ENST00000556017 588 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AL157813.1-201ENST00000612996 587 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AC091812.3-201ENST00000621362 345 ntBASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.1■□□□□ 0.17
COL4A3BPQ9Y5P4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AC018629.1-201ENST00000623381 1736 ntBASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 XBP1P1-201ENST00000436573 652 ntBASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AL133466.1-201ENST00000447582 150 ntBASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AL161670.2-201ENST00000557650 1227 ntBASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 KRT8P21-201ENST00000430398 1491 ntBASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL4A3BPQ9Y5P4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL4A3BPQ9Y5P4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.08■□□□□ 0.17
COL4A3BPQ9Y5P4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
COL4A3BPQ9Y5P4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL4A3BPQ9Y5P4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL4A3BPQ9Y5P4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COL4A3BPQ9Y5P4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms