Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM17Q9Y577 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC007950.2-201ENST00000615045 2347 ntBASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 MROH4P-201ENST00000431302 1578 ntBASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 DPY19L2P4-201ENST00000479881 442 ntBASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC108724.1-201ENST00000481669 352 ntBASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC126755.5-201ENST00000622756 267 ntBASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM17Q9Y577 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AL050341.2-201ENST00000567508 1541 ntBASIC16.05■□□□□ 0.16
TRIM17Q9Y577 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AC092910.2-201ENST00000491262 348 ntBASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AC011431.1-201ENST00000512971 230 ntBASIC16.05■□□□□ 0.16
TRIM17Q9Y577 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 EEF1DP7-201ENST00000580496 513 ntBASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AC006986.1-201ENST00000612764 241 ntBASIC16.05■□□□□ 0.16
TRIM17Q9Y577 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms