Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CUEDC1Q9NWM3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.01□□□□□ -0.17
CUEDC1Q9NWM3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CUEDC1Q9NWM3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CUEDC1Q9NWM3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CUEDC1Q9NWM3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CUEDC1Q9NWM3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AC064801.2-201ENST00000625052 1303 ntBASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14□□□□□ -0.17
CUEDC1Q9NWM3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AC104073.2-201ENST00000453737 312 ntBASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 SERPINA13P-202ENST00000478994 924 ntBASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 AC091917.2-201ENST00000505002 744 ntBASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.99□□□□□ -0.17
CUEDC1Q9NWM3 U62317.3-201ENST00000608319 855 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms