Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AL360270.3-201ENST00000609118 1348 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 SERPINA13P-202ENST00000478994 924 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 FTLP10-202ENST00000505798 471 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC026434.2-201ENST00000506094 1078 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC105129.2-201ENST00000559536 390 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 MIR4783-201ENST00000580343 82 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC067750.1-201ENST00000608826 6545 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 AC004241.5-201ENST00000623870 2448 ntBASIC15.25■□□□□ 0.03
CD248Q9HCU0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 AP000593.2-201ENST00000542775 1433 ntBASIC15.25■□□□□ 0.03
CD248Q9HCU0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD248Q9HCU0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD248Q9HCU0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD248Q9HCU0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
CD248Q9HCU0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms