Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 AC060814.4-201ENST00000594169 2163 ntBASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 AC024075.2-201ENST00000598112 1473 ntBASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 AL022323.5-201ENST00000624101 2059 ntBASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.82□□□□□ -0.52
SMIM3Q9BZL3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AL355102.3-201ENST00000554299 1678 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AL021155.1-201ENST00000438808 2637 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AC005237.2-201ENST00000434368 219 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 RNA5SP416-201ENST00000516838 111 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AC145285.3-201ENST00000564603 959 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AC007967.4-201ENST00000614700 386 ntBASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM3Q9BZL3 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 AC009474.1-201ENST00000455096 1565 ntBASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM3Q9BZL3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms