Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
USP13Q92995 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.13■□□□□ 0.01
USP13Q92995 AHCYP4-201ENST00000419201 1315 ntBASIC15.13■□□□□ 0.01
USP13Q92995 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP13Q92995 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
USP13Q92995 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 AC018442.1-201ENST00000421439 2061 ntBASIC15.12■□□□□ 0.01
USP13Q92995 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.12■□□□□ 0.01
USP13Q92995 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 PHBP15-201ENST00000574228 665 ntBASIC15.12■□□□□ 0.01
USP13Q92995 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.12■□□□□ 0.01
USP13Q92995 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 AC073352.2-201ENST00000609385 439 ntBASIC15.12■□□□□ 0.01
USP13Q92995 LINC01783-202ENST00000614408 828 ntBASIC15.12■□□□□ 0.01
USP13Q92995 BX284668.2-205ENST00000619677 828 ntBASIC15.12■□□□□ 0.01
USP13Q92995 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.12■□□□□ 0.01
USP13Q92995 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP13Q92995 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
USP13Q92995 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
USP13Q92995 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.11■□□□□ 0.01
USP13Q92995 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
USP13Q92995 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
USP13Q92995 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
USP13Q92995 NOC2LP1-201ENST00000450578 752 ntBASIC15.11■□□□□ 0.01
USP13Q92995 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.11■□□□□ 0.01
USP13Q92995 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.11■□□□□ 0.01
USP13Q92995 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 PGAM1P5-201ENST00000548011 764 ntBASIC15.11■□□□□ 0.01
USP13Q92995 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.11■□□□□ 0.01
USP13Q92995 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.11■□□□□ 0.01
USP13Q92995 MIR3677-201ENST00000578964 60 ntBASIC15.11■□□□□ 0.01
USP13Q92995 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.11■□□□□ 0.01
USP13Q92995 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.11■□□□□ 0.01
USP13Q92995 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.11■□□□□ 0.01
USP13Q92995 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.11■□□□□ 0.01
USP13Q92995 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
USP13Q92995 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.11■□□□□ 0.01
USP13Q92995 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP13Q92995 AC051619.9-201ENST00000623237 597 ntBASIC15.11■□□□□ 0.01
USP13Q92995 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.11■□□□□ 0.01
USP13Q92995 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms