Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC21.79■■□□□ 1.08
CCNB3Q8WWL7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AL512310.5-201ENST00000551999 515 ntBASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 SNORD3B-1-201ENST00000577988 758 ntBASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 CTBP2P8-201ENST00000422584 1330 ntBASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 AC005089.1-201ENST00000619486 2241 ntBASIC21.78■■□□□ 1.08
CCNB3Q8WWL7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 AL139008.1-201ENST00000437894 228 ntBASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 CHCHD2P2-201ENST00000503744 321 ntBASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 AC012073.1-201ENST00000606114 1108 ntBASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 ANKRD26P3-201ENST00000454044 2748 ntBASIC21.77■■□□□ 1.08
CCNB3Q8WWL7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC21.77■■□□□ 1.07
CCNB3Q8WWL7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCNB3Q8WWL7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNB3Q8WWL7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCNB3Q8WWL7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 OR2A1-AS1-210ENST00000496968 531 ntBASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 HPX-213ENST00000615166 826 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 AC244250.3-201ENST00000620749 366 ntBASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 KRT8P43-201ENST00000406052 1458 ntBASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 TCAM1P-207ENST00000485295 1537 ntBASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 AC027601.5-201ENST00000624065 2482 ntBASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNB3Q8WWL7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms