Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 LRRC59-203ENST00000576448 1531 ntBASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 MIR770-201ENST00000390219 98 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SOCS2P1-201ENST00000417727 557 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC098850.1-201ENST00000419919 790 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TSPY16P-201ENST00000449843 468 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC022616.1-201ENST00000518688 554 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC092552.1-201ENST00000547243 906 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AL132655.2-201ENST00000596276 594 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AC133539.2-201ENST00000604757 467 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 MYADML-201ENST00000474610 2147 ntBASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC107Q8WV48 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCDC107Q8WV48 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms