Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AC015802.1-201ENST00000588104 1449 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 PUDPP3-201ENST00000445368 636 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 CICP12-201ENST00000455801 843 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AC125604.1-201ENST00000496255 707 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AC079328.1-201ENST00000560358 952 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AC009884.2-201ENST00000603110 324 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLDND2Q8NHS1 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC092506.1-202ENST00000401022 528 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RN7SL769P-201ENST00000469386 295 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 RN7SL720P-201ENST00000488178 304 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 IMP3P2-201ENST00000489760 475 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 GCOM2-201ENST00000509133 1104 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC024681.1-201ENST00000521917 487 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC131206.1-201ENST00000538078 1211 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC005962.1-201ENST00000584100 773 ntBASIC12.31□□□□□ -0.44
CLDND2Q8NHS1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms