Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 CSNK1G2P1-201ENST00000442675 955 ntBASIC22.03■■□□□ 1.12
VPS8Q8N3P4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 PRSS3P1-201ENST00000503996 742 ntBASIC22.02■■□□□ 1.12
VPS8Q8N3P4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 AP000322.3-201ENST00000608665 388 ntBASIC22.02■■□□□ 1.12
VPS8Q8N3P4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
VPS8Q8N3P4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC22.02■■□□□ 1.11
VPS8Q8N3P4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
VPS8Q8N3P4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
VPS8Q8N3P4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 CR383656.3-201ENST00000551315 183 ntBASIC22.01■■□□□ 1.11
VPS8Q8N3P4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 MIR5572-201ENST00000583188 137 ntBASIC22.01■■□□□ 1.11
VPS8Q8N3P4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC22.01■■□□□ 1.11
VPS8Q8N3P4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
VPS8Q8N3P4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC22■■□□□ 1.11
VPS8Q8N3P4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC22■■□□□ 1.11
VPS8Q8N3P4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
VPS8Q8N3P4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC22■■□□□ 1.11
VPS8Q8N3P4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC22■■□□□ 1.11
VPS8Q8N3P4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC22■■□□□ 1.11
VPS8Q8N3P4 LYPLA2P1-203ENST00000447689 696 ntBASIC22■■□□□ 1.11
VPS8Q8N3P4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
VPS8Q8N3P4 AC079112.1-201ENST00000454972 939 ntBASIC22■■□□□ 1.11
VPS8Q8N3P4 RN7SL8P-201ENST00000461771 266 ntBASIC22■■□□□ 1.11
VPS8Q8N3P4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC22■■□□□ 1.11
VPS8Q8N3P4 IGHV3-37-201ENST00000518544 340 ntBASIC22■■□□□ 1.11
VPS8Q8N3P4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC22■■□□□ 1.11
VPS8Q8N3P4 RN7SL470P-201ENST00000583069 259 ntBASIC22■■□□□ 1.11
VPS8Q8N3P4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC22■■□□□ 1.11
VPS8Q8N3P4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms