Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AC006001.1-201ENST00000325130 474 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 MIR326-201ENST00000362220 95 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AC007551.1-201ENST00000457394 519 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 KRT90P-201ENST00000549264 1064 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 PCDHA5-203ENST00000614258 4248 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 MEX3B-202ENST00000558133 4333 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 TMBIM7P-202ENST00000641474 1516 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AK2P2-201ENST00000439142 405 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 TTTY23B-201ENST00000442790 549 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CHMP1AP1-201ENST00000445563 662 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 PPY2P-201ENST00000582808 702 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AC025048.6-201ENST00000634326 1161 ntBASIC13.44□□□□□ -0.26
REEP3Q6NUK4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
REEP3Q6NUK4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms